منابع مشابه
Helical tubes in crowded environments.
When placed in a crowded environment, a semiflexible tube is forced to fold so as to make a more compact shape. One compact shape that often arises in nature is the tight helix, especially when the tube thickness is of comparable size to the tube length. In this paper we use an excluded volume effect to model the effects of crowding. This gives us a measure of compactness for configurations of ...
متن کاملPolymer translocation in crowded environments.
We study the effect of the crowded environments on the translocation of a polymer through a pore in a membrane. By systematically treating the entropic penalty due to crowding, we show that the translocation dynamics are significantly altered, leading to novel scaling behaviors of the translocation time. We also observe new and qualitatively different translocation regimes depending upon the ex...
متن کاملQuantifying transport in crowded biochemical environments
Transport of cells and biochemical molecules often takes place in crowded, heterogeneous environments. As such, it is important we understand how to quantify crowded transport phenomena, and the possibilities of extracting transport coefficients from limited observations. We employ a volume-excluding random walk model on a square lattice where different fractions of lattice sites are filled wit...
متن کاملIon specificity of macromolecules in crowded environments.
Macromolecular crowding plays a significant role in the solubility and stability of biomacromolecules. In this work, the thermo-sensitive poly(N-isopropylacrylamide) (PNIPAM) has been employed as a model system to study the specific ion effects on the solubility of macromolecules in crowded environments of dextran and polyethylene glycol (PEG). Our study demonstrates that crowding agents can in...
متن کاملDiffusion-limited reactions in crowded environments.
Diffusion-limited reactions are usually described within the Smoluchowski theory, which neglects interparticle interactions. We propose a simple way to incorporate excluded-volume effects building on simulations of hard sphere in the presence of a sink. For large values of the sink-to-particle size ratio R(s), the measured encounter rate is in good agreement with a simple generalization of the ...
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ژورنال
عنوان ژورنال: Physical Review E
سال: 2007
ISSN: 1539-3755,1550-2376
DOI: 10.1103/physreve.75.051114